BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027A01SP1|AL428639
(869 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1761 1682 0.0
>3x_Contig1761
Length = 23186
Score = 1682 bits (842), Expect = 0.0
Identities = 859/870 (98%), Gaps = 1/870 (0%)
Strand = Plus / Minus
Query: 1 gatcttttgccttaccttaggatttttagaaagctctagtgcgtagtatttttcgattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12657 gatcttttgccttaccttaggatttttagaaagctctagtgcgtagtatttttcgattgt 12598
Query: 61 ttctaacgccaatttaggattctgggagaaaatctgaagatccttggcctctggtccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12597 ttctaacgccaatttaggattctgggagaaaatctgaagatccttggcctctggtccttc 12538
Query: 121 taaaatatttgctactgaatcagtaggtttcaatgaagggtgatcaacaaccggatgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12537 taaaatatttgctactgaatcagtaggtttcaatgaagggtgatcaacaaccggatgaag 12478
Query: 181 ttgatgctcagcactgatattttcaccaacttgttctgcagtaatcccagtatcattgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12477 ttgatgctcagcactgatattttcaccaacttgttctgcagtaatcccagtatcattgat 12418
Query: 241 agcttggtataatgcactggccttgaacttttcataacttgagtttttcaaatgcttctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12417 agcttggtataatgcactggccttgaacttttcataacttgagtttttcaaatgcttctt 12358
Query: 301 ggatgttgcgtcctgctgcgtggacaawagtacatcattaawwtcttgcgcatatwtgaa 360
||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||
Sbjct: 12357 ggatgttgcgtcctgctgcgtggacaatagtacatcattaatttcttgcgcatatttgaa 12298
Query: 361 ttcaacgtaatcataaatgtcctgtaag-agttcaactctgtcatggattgawtgcwgaa 419
|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||
Sbjct: 12297 ttcaacgtaatcataaatgtcctgtaaggagttcaactctgtcatggattgattgctgaa 12238
Query: 420 gtattcatccacaawtggatcatgaatatccagcttttcgtagaaagttttcacgtagtc 479
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12237 gtattcatccacaattggatcatgaatatccagcttttcgtagaaagttttcacgtagtc 12178
Query: 480 cctcttgtaaatgawactgtggaactcggtatcataaaawacaatatcccataagtcatc 539
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 12177 cctcttgtaaatgatactgtggaactcggtatcataaaatacaatatcccataagtcatc 12118
Query: 540 ttcgattagcacaaawccgtctttgcttcttgaagagatatagttacgacggtaagcata 599
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12117 ttcgattagcacaaatccgtctttgcttcttgaagagatatagttacgacggtaagcata 12058
Query: 600 aatgaatgaaacctcgaggttttcctgctgaatgaagttgatagcatttccaatggcttc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12057 aatgaatgaaacctcgaggttttcctgctgaatgaagttgatagcatttccaatggcttc 11998
Query: 660 tttgaattccgtagtatcgtaatcggcatcaaaatttttatctactgcaatcttgtcact 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11997 tttgaattccgtagtatcgtaatcggcatcaaaatttttatctactgcaatcttgtcact 11938
Query: 720 aatccagttcttttcaagctcaaggtcttctggcgatagtttaccgtagttcttcaatcc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11937 aatccagttcttttcaagctcaaggtcttctggcgatagtttaccgtagttcttcaatcc 11878
Query: 780 tgttctcaactcttggtatctctctggaatgtctgcctttctgatgttcatatcttcttc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11877 tgttctcaactcttggtatctctctggaatgtctgcctttctgatgttcatatcttcttc 11818
Query: 840 agttaacaagttcttcttcaaatcttgcaa 869
||||||||||||||||||||||||||||||
Sbjct: 11817 agttaacaagttcttcttcaaatcttgcaa 11788
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6688
Number of Sequences: 1807
Number of extensions: 6688
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 869
length of database: 10,358,551
effective HSP length: 16
effective length of query: 853
effective length of database: 10,329,639
effective search space: 8811182067
effective search space used: 8811182067
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)